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2024-04-19 23:45:53

CRISPR

CRISPR: History of gene editing tool
CRISPR: History of gene editing tool

CRISPR-Cas9 system discovered in 1987, revolutionizing genome editing. Widely used for genetic research and potential medical applications.

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1987-12-01
Publication of the CRISPR mechanism

The nucleotide sequence of the iap gene in Escherichia coli responsible for alkaline phosphatase isozyme conversion was identified in a journal article. This event marked the first publication of the CRISPR mechanism.

1993
Discovery of CRISPR locus by Francisco Mojica

Francisco Mojica characterized the CRISPR locus in 1993, recognizing common features in repeat sequences that led to the term CRISPR. He later hypothesized that CRISPR is an adaptive immune system.

2000-01-18
Discovery of Short Regularly Spaced Repeats (SRSR)

On 18th January 2000, more clustered repeats of DNA were identified in other bacteria and archaea, which were termed Short Regularly Spaced Repeats (SRSR).

2002-03-01
First publication of the term CRISPR-Cas9

The term CRISPR-Cas9 was published for the first time in a scientific article by Mojica, Jansen, Embden, Gaastra, and Schouls, aiming to understand if it is a mechanism bacteria use to protect themselves from viral infection.

2005-01-01
Initiation of CRISPR investigation by Jennifer Doudna and Jillian Banfield

Jennifer Doudna and Jillian Banfield began investigating CRISPR based on sequence analysis of CRISPR structures from different bacterial strains.

2005-08-01
French Scientists Discover CRISPR Spacer Sequences

On 1st August 2005, French scientists suggested that CRISPR spacer sequences can provide cell immunity against phage infection and degrade DNA, revealing a key aspect of CRISPR's function.

2005-11-11
Identification of New Families of Cas Genes

On 11th November 2005, American researchers identified new families of Cas genes that seemed to assist in protecting bacteria against invading viruses, expanding the understanding of CRISPR's mechanisms.

2006-03
Hypothetical scheme of adaptive immunity proposed by Eugene Koonin

In March 2006, Eugene Koonin proposed a hypothetical scheme for CRISPR cascades as a bacterial immune system based on inserts homologous to phage DNA. This laid the foundation for further research in the field.

2007-03-23
Demonstration of CRISPR-Cas9 Role in Bacterial Immunity

Experiments conducted on 23rd March 2007 demonstrated for the first time the role of CRISPR together with Cas9 genes in protecting bacteria against viruses, showcasing the practical application of this technology.

2008-02
Introduction of the Term 'Protospacer'

In February 2008, scientists coined the term 'protospacer' to refer to the viral sequence that corresponds to a 'spacer' in the CRISPR-Cas9 system, aiding in the precise description of CRISPR components.

2008-08
Spacer sequences transcribed into guide RNAs

In August 2008, John van der Oost and colleagues discovered that spacer sequences from phages are transcribed into small RNAs called CRISPR RNAs (crRNAs), which guide Cas proteins to target DNA.

2008-12
CRISPR acts on DNA targets

In December 2008, Luciano Marraffini and Erik Sontheimer revealed that CRISPR targets DNA, not RNA, contrary to previous assumptions. This discovery paved the way for understanding the interference mechanism of CRISPR-Cas systems.

2009
RNA-Guided RNA Cleavage by a CRISPR RNA-Cas Protein Complex

Hale, C.R. et al. in 2009 demonstrated the RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex, providing insights into the intricate mechanisms of CRISPR technology.

2010-12
Cas9 cleaves target DNA

In December 2010, Sylvain Moineau and team demonstrated that CRISPR-Cas9 creates double-stranded breaks in target DNA precisely 3 nucleotides upstream of the PAM sequence. They confirmed that Cas9 is the sole protein required for cleavage in the Type II CRISPR system.

2011-03
Jennifer Doudna and Emmanuelle Charpentier Collaboration on Bacterial CRISPR System

In March 2011, Jennifer Doudna and Emmanuelle Charpentier started collaborating to study the bacterial CRISPR system, a crucial step towards the development of the CRISPR-Cas9 gene editing technology.

2011-07
CRISPR systems can function heterologously in other species

In July 2011, Virginijus Siksnys and colleagues demonstrated that CRISPR systems can function across different species by cloning and expressing a Type II CRISPR-Cas locus in E. coli. This experiment verified the self-contained nature of CRISPR systems.

2012-05-25
UC Berkeley First to File Patent Application for CRISPR-Cas9 System

On May 25, 2012, UC Berkeley was the first to file a patent application for the key components of the CRISPR-Cas9 system, marking a significant milestone in the development of gene editing technology.

2012-06-28
First Patent Application for CRISPR-Cas9 Gene Editing

Doudna, Charpentier, Martin Jinek of UC Berkeley and Krzystof Chylinski of the University of Vienna file the first patent application for CRISPR-Cas9 gene editing, covering all environments such as bacteria, plants, animals, and human cells.

2012-08-17
Publication of New Gene Editing Method using CRISPR-Cas9

On 17th August 2012, a radically new gene editing method that harnessed the CRISPR-Cas9 system was published, revolutionizing the field of genetic engineering.

2012-09-25
Elucidation of CRISPR/Cas9 DNA Editing Potential

Scientists at Vilnius University published a paper on 25th September 2012 elucidating the potential of CRISPR/Cas9 to edit DNA, showcasing the versatility of this gene-editing tool.

2012-12-12
First Use of CRISPR-Cas9 Gene Editing in Living Cells

Six separate research teams, including Doudna’s, publish the first use of CRISPR-Cas9 gene editing in living cells, specifically human and animal cells.

2013-01
Feng Zhang Adapts CRISPR-Cas9 for Genome Editing

In January 2013, Feng Zhang from the Broad Institute of MIT and Harvard successfully adapted CRISPR-Cas9 for genome editing in eukaryotic cells, showcasing its potential for targeted genome cleavage and homology-directed repair.

2014-04-15
Broad Institute receives first patent for CRISPR-Cas9 in plant and animal cells

The Broad Institute is granted the initial patent for CRISPR-Cas9, specifically for applications in plant and animal cells.

2015
CRISPR

CRISPR technology has become popular in the past five years, with genome engineers working on developing a highly specific and programmable platform for various biological and translational technologies.

2016-01-11
USPTO announces interference proceeding for Broad Institute's CRISPR-Cas9 patents

The U.S. Patent and Trademark Office (USPTO) initiates an interference proceeding to determine if the Broad Institute's patents, including a pending application, conflict with UC's foundational patent application for CRISPR-Cas9.

2017-05-10
UC Granted First EU Patent EP2800811

On May 10, 2017, the European Patent Office (EPO) granted the University of California (UC) team the first CRISPR-Cas9 patent in the European Union (EU), covering the use of CRISPR-Cas9 in plants, animals, and human cells.

2017-07-25
UC Appeals PTAB Decision to U.S. Court of Appeals

On July 25, 2017, the University of California (UC) appealed the Patent Trial and Appeal Board (PTAB) decision regarding CRISPR to the U.S. Court of Appeals for the Federal Circuit.

2018-06-19
UC Granted EU Patent EP3241902

The European Patent Office (EPO) granted the University of California (UC) team a patent for methods and compositions related to RNA-directed target DNA modification and modulation of transcription in various settings.

2018-09-10
UC Granted U.S. Patent 10,000,772

The United States Patent and Trademark Office (USPTO) granted the University of California (UC) team their first patent on CRISPR-Cas9, which allows for easier use of the gene-editing tool within plant or animal cells or externally.

2018-10-30
US Court of Appeals Affirms Broad Institute Patent for CRISPR-Cas9

The US Court of Appeals affirms the USPTO's decision that the Broad Institute's patent for using CRISPR-Cas9 in plant and animal cells is distinct from UC's patent for using CRISPR-Cas9 in any environment.

2019-03-12
UC Granted U.S. Patent 10,227,611 for CRISPR-Cas9 Gene Editing Technology

The USPTO grants UC a patent covering CRISPR-Cas9 gene editing technology using single-molecule guide RNAs and its applications in any cell.

2019-04-03
UC Granted EU Patent EP3401400

The European Patent Office (EPO) granted a patent to the University of California (UC) team for methods and compositions related to RNA-directed target DNA modification and transcription modulation in eukaryotic cells.

2019-04-17
USPTO Notice of Allowance for U.S. Patent No. 10,337,029

The United States Patent and Trademark Office (USPTO) issued a notice of allowance for a patent application covering methods of cleaving, modifying, or targeting DNA in cells using a CRISPR protein-RNA complex. The patent is scheduled to be issued on July 2, 2019.

2019-04-23
UC Granted U.S. Patent 10,266,850

The University of California (UC) was granted a U.S. patent numbered 10,266,850 for a specific innovation or invention.

2019-05-20
UC Team Granted Patent for CRISPR Methods with Single-Molecule Guide RNAs

On May 20, 2019, the USPTO granted a patent to the UC team for CRISPR methods and systems utilizing single-molecule guide RNAs in any environment. The patent covers techniques for targeting and modifying DNA using Cas9 proteins with specific mutations.

2019-05-21
USPTO Issues Notice of Allowance for CRISPR Patent Application

On May 21, 2019, the USPTO issued a notice of allowance for a patent application (U.S. 16/201,836) related to CRISPR methods targeting, modifying, or cleaving DNA using single-molecule guide RNAs. This further expands the scope of CRISPR technology patents.

2019-05-22
USPTO Notice of Allowance for Patent Application on Genetically Modified Cell Production

On May 22, 2019, the USPTO issued a notice of allowance for a patent application (U.S. 16/201,855) that covers methods of producing a genetically modified cell using the Cas9 protein or DNA-targeting RNA.

2019-05-28
UC Granted U.S. Patent 10,301,651 for CRISPR Methods

On May 28, 2019, UC was granted U.S. Patent 10,301,651 for CRISPR methods that allow sequence-specific repression or activation of gene expression in various cell types.

2019-06-04
UC Granted U.S. Patent 10,308,961 for CRISPR Methods

On June 4, 2019, UC was granted U.S. Patent 10,308,961 for CRISPR methods enabling sequence-specific repression or activation of gene expression in all cell types.

2019-06-12
UC team granted patent for CRISPR methods

The USPTO granted a patent to a UC team for CRISPR methods involving targeting and binding a target DNA, modifying a target DNA, or modulating transcription from a target DNA in a cell. The patent covers both single guide RNAs and dual guide RNAs.

2019-06-25
PTAB declares interference between UC CRISPR patents and Broad patents

On June 25, 2019, the Patent Trial and Appeal Board (PTAB) declared an interference between 10 University of California (UC) CRISPR patents and 13 Broad Institute patents, along with one Broad patent application.

2019-07-02
UC granted U.S. Patent 10,337,029 for CRISPR technology

July 2, 2019, saw the United States Patent and Trademark Office (USPTO) granting a patent to the UC team. The patent covers methods of cleaving, modifying, or targeting and binding DNA in a cell using a CRISPR protein-RNA complex.

2019-07-16
UC granted U.S. Patent 10,351,878 for genetically modified cell production

On July 16, 2019, the USPTO granted the 9th patent to the UC team. This patent covers methods of producing a genetically modified cell by introducing the Cas9 protein or a nucleic acid encoding it, along with a single molecule DNA-targeting RNA.

2019-07-23
UC Granted U.S. Patents 10,358,658 & 10,358,659

On July 23, 2019, the USPTO granted two patents to the UC team. The first patent involves targeting and modifying a target DNA using single-molecule guide RNAs, while the second patent covers CRISPR methods for modifying DNA with a Cas9 protein containing mutations in key domains.

2019-08-20
UC Granted U.S. Patent 10,385,360

On August 20, 2019, the UC team was granted another US patent, further expanding their portfolio. The specifics of this patent were not mentioned in the provided information.

2019-09-03
UC Granted U.S. Patent 10,400,253

On September 3, 2019, the US Patent and Trademark Office (USPTO) granted a patent to the UC team, increasing their total portfolio to 11. The patent covers nucleic acid molecules encoding single-molecule guide RNAs and CRISPR-Cas9 compositions.

2019-09-10
UC Granted U.S. Patent 10,407,697

On September 10, 2019, the US Patent and Trademark Office (USPTO) granted another patent to the UC team, bringing their total portfolio to 12. This patent covers compositions of single-molecule, DNA-targeting RNA (sgRNA) and Cas9 protein or nucleic acid encoding the Cas9 protein.

2019-10-01
UC Granted U.S. Patent 10,421,980

The University of California (UC) received the U.S. Patent 10,421,980, expanding their patent portfolio to 15. This patent likely involves DNA-targeting RNAs with defined lengths that hybridize with Cas9 proteins to target specific DNA sequences and methods for modifying or modulating transcription from target DNA.

2019-10-15
UC Granted U.S. Patent 10,443,076

On October 15, 2019, the US Patent and Trademark Office granted a patent to the UC team, increasing their total CRISPR-Cas9 patent portfolio to 17. This patent specifically covers methods and compositions for RNA-directed target DNA modification and modulation of transcription.

2019-11-26
UC Granted U.S. Patent 10,487,341

On November 26, 2019, the US Patent and Trademark Office granted another patent to the UC team, further expanding their CRISPR-Cas9 patent portfolio. This patent covers methods of targeting, binding, and cleaving target DNA in prokaryotic cells using Cas9 protein and single molecule DNA targeting RNAs.

2019-12-24
UC Granted U.S. Patent 10,513,712

On December 24, 2019, the USPTO granted a patent to the UC team, increasing their total portfolio to 19. The patent covers compositions and kits with Cas9 and DNA-targeting RNA.

2019-12-31
UC Granted U.S. Patent 10,519,467

On December 31, 2019, the USPTO granted a patent to the UC team, bringing their total portfolio to 20. The patent covers methods of producing a genetically modified cell.

2020
Nobel Prize in Chemistry awarded for CRISPR-Cas9

In 2020, The Nobel Prize in Chemistry was awarded to Emmanuelle Charpentier and Jennifer Doudna for their development of CRISPR-Cas9 as a powerful gene-editing tool.

End of the Timeline
CRISPR

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CRISPR

CRISPR: History of gene editing tool
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